Rhodnius Nitrophorins: Binding Constant and Electrochemcial Measurements

0
0
2650 days ago, 579 views
PowerPoint PPT Presentation

Presentation Transcript

Slide 1

Rhodnius Nitrophorins: Binding Constant and Electrochemcial Measurements Max Shokhirev University of Arizona Chemistry Department Walker Lab

Slide 2

The kissing bug… Nitrophorins are found in the salivary organs of Rhodnius Prolixus which is normally known as the kissing bug. Rhodnius is local to the Amazon River Delta and has spread as far north as Arizona and Texas Rhodnius additionally spreads Chagas ailment all through Central and South America, which can be lethal.

Slide 3

Nitrophorins Belong to the lipocalin family. A Histidine buildup arranges the heme Bind NO and frequently different ligands Nitrophorins 1-4 found in the spit of fifth instar Rhodnius. Nitrophorin 5 and 6 discovered just amid the principal instar. NP7 has been communicated in a research center setting, however hasn't been recognized in the bug itself 1

Slide 4

Nitrophorin Environment Yummy Blood! NO uprooted by Hm, which is available at a higher focus at the site of the chomp Salivary organs: pH ~5.5; NO bound Host tissues: pH 7.3; Hm bound

Slide 5

General Nitrophorin Function Nitrophorins are N O transport proteins Use a heme cofactor to tie and discharge the NO The Fe(III) heme is balanced out with a specific end goal to avert auto decrease of the Fe focus NO official to Fe(II) is irreversible! NO discharged in the host tissues bringing on vasodilation.

Slide 6

Other Nitrophorin Functions Anticoagulant properties of NP2 and NP3 NP2 was found to tie to element IX of the Xase coagulation framework 2 . Platelet collection restraint by NP7 Through a NO intervened instrument 3 Histamine restricting serves a calming capacity

Slide 7

Nitrophorin Similarity Nitrophorins 1-4 share 38% arrangement personality NP2 and NP3 have 79% succession character NP1 and NP4 have 90% grouping character All have the same auxiliary themes: Eight stranded beta barrel with a b-sort heme inside the barrel

Slide 8

AB Loop His 57 Heme Center Structure of NP2 GH Loop EF Loop From PDB 1T68 4

Slide 9

One approach to consider a protein… Site-coordinated mutagenesis thinks about Synthesize NP2 with a select amino corrosive changed. Watch the adjustments in redox potential , ligand restricting constants, NMR, EPR… Rationalize the watched patterns. Distribute a paper.

Slide 10

What I do… Mostly Spectroscopy Binding Constant Measurements Electrochemical Measurements somewhat Cyclic Voltometry

Slide 11

Binding Constant Measurements The UV-vis range of nitrophorins changes upon ligand authoritative. The proportion of ligand-bound to without ligand can be measured by watching the adjustment in absorbance for one animal groups as an element of changing ligand fixation We can fit the subsequent information utilizing the accompanying tight ligand restricting condition:

Slide 12

Example Measurement

Slide 13

Binding Constant Measurements This is an effective technique for the investigation of a protein, for example, a nitrophorin: Allows us to watch how pH influences ligand restricting Allows us to contrast diverse ligands with deference with nitrophorin liking for those ligands Each mutant considered along these lines uncovers something about the significance of the transformed amino corrosive to protein work.

Slide 14

Electrochemistry NO tends to auto lessen Fe(III) to Fe(II) if the Fe(III) is not ensured. NO separation constants from Fe(II) in picomolar run Nitrophorins balance out the Fe(III) type of the heme focus through both heme unsettling and adversely charged buildups close to the heme focus. It is conceivable to quantify the potential at which half of the nitrophorins in arrangement are lessened by watching the range of the nitrophorin arrangement at various connected possibilities

Slide 15

Electrochemical Studies Measuring redox potential: Different pH values With ligands bound (NO, Hm, Im) or just H 2 O Redox potential identified with fixation through the Nernst Equation:

Slide 16

Spectrophotometer: Records the range of the protein in the electrochemical cell Potentiostat: Provides an enduring quantifiable electrical potential Physical Setup

Slide 17

Argon Gas: Helps counteract oxygen defilement of the protein arrangement Physical Setup

Slide 18

Auxiliary Electrode Working Gold terminal diminishes the protein at the phone window. Reference Electrode Light Protein The Electrochemical Cell Argon Gas

Slide 19

Absorbance versus Applied Potential Electrochemical Data

Slide 20

The Electrochemical Cell

Slide 21

Thank you… References 1) Moˆnica F. Moreira; Heloisa S.L. Coelho; Russolina B. Zingali; Pedro L. Oliveira; Hatisaburo Masuda (2003) Insect Biochemistry and Molecular Biology 33, 23-28. 2) Nanda P. Gudderra; Jose' M. C. Ribeiro; John F. Andersen. (2005) J. Natural Chemistry 280 , 25023-28. 3) John F. Andersen; Nanda P. Gudderra; Ivo M. B. Francischetti; Jesus G. Valenzuela; and Jose' M. C. Ribeiro. (2004) Biochemistry 43 , 6987-96 Ribeiro, J. M. C.; Hazzard, J. M. H.; Nussenzveig, R.; Champagne, D.; Walker, F. A. (1993) Science 260 , 539-541. Shokhireva, T. Kh.; Berry, R. E.; Uno, E.; Balfour, C. A.; Zhang, H.; Walker, F. A. (2003) Proc. Natl. Acad. Sci. USA 100, 3778-3783. Andersen, J. F.; Montfort, W. R. (2000) J. Biol. Chem. 275 , 30496-30503. Roberts, S. A.; Weichsel, A.; Qiu, Y.; Shelnutt, J. A.; Walker, F. A.; Montfort, W. R. (2001) Biochemistry 40 , 11327-11337. Affirmations: Dr. Walker, Dr. Berry, Dr. Shokhireva, Honjun Zhang, and whatever is left of the Walker Lab

SPONSORS